Return to main results Retrieve Phyre Job Id

Job DescriptionP37309
Confidence98.46%DateThu Jan 5 11:55:08 GMT 2012
Rank48Aligned Residues83
% Identity19%Templated2fbha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20......... 30.........40.........50.........60..... ....70.........80.........90
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Query Sequence  DETRLGIVLLLSELG. ELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQ. . . GKWVHYRLSPHIPAWAAKIIDEAWR
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Template Sequence  SQARWLVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEAIAAS
Template Known Secondary structure  TTT
SS

BT

TTS

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TT
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   91......
Predicted Secondary structure 
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Query Sequence  CEQEKVQ
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Template Conservation         
Template Sequence  VRNDVLT
Template Known Secondary structure  TT
Template Predicted Secondary structure 
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   114.....120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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