Job Description P37309 Confidence 97.99% Date Thu Jan 5 11:55:08 GMT 2012 Rank 96 Aligned Residues 88 % Identity 23% Template d2esha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		T	R	L	G	I	V	L	L	L	S	E	L	G	E	L	C	V	C	D	L	C	T	A	L	.	.	.	.	.	.	.	.	.	D	Q	S	Q	P	K	I	S	R	H	L	A	L	L	R	E	S	G	L	L	L	D	R	K	Q	G	K	.	.	.	.	W	V	H	Y	R	L	S	P	H	I	P	A	W	A	A	K
Query Conservation																										.	.	.	.	.	.	.	.	.																												.	.	.	.
Alig confidence														.												.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation														.
Template Sequence		L	A	S	T	I	L	L	L	V	A	E	K	.	P	S	H	G	Y	E	L	A	E	R	L	A	E	F	G	I	E	I	P	G	I	G	H	M	G	N	I	Y	R	V	L	A	D	L	E	E	S	G	F	L	S	T	E	W	D	T	T	V	S	P	P	R	K	I	Y	R	I	T	P	Q	G	K	L	Y	L	R	E
Template Known Secondary structure													S	.		B											T	T			S	S	T	T																	T	T	S								S	S	S	S
Template Predicted Secondary structure														.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	D	E	A	W	R	C	E	Q	E	K	V	Q	A	I	V	R	N	L	A	R	Q
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		I	L	R	S	.	L	E	D	M	K	R	R	I	E	T	L	E	E	R	I	K	R	V
Template Known Secondary structure						.
Template Predicted Secondary structure						.
Template SS confidence
		93	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions