Job Description P37309 Confidence 97.95% Date Thu Jan 5 11:55:08 GMT 2012 Rank 98 Aligned Residues 71 % Identity 18% Template d1xmaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		T	R	L	G	I	V	L	L	L	S	E	L	G	E	L	C	V	C	D	L	C	T	A	L	.	.	.	.	.	.	.	.	D	Q	S	Q	P	K	I	S	R	H	L	A	L	L	R	E	S	G	L	L	L	D	R	K	Q	G	.	.	.	K	W	V	H	Y	R	L	S	P	H	I	P	A	W	A	A	K	I	I
Query Conservation																										.	.	.	.	.	.	.	.																											.	.	.
Alig confidence													.													.	.	.	.	.	.	.	.																											.	.	.
Template Conservation													.
Template Sequence		V	D	T	I	I	L	S	L	L	I	E	.	G	D	S	Y	G	Y	E	I	S	K	N	I	R	I	K	T	D	E	L	Y	V	I	K	E	T	T	L	Y	S	A	F	A	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	K	R	R	T	Y	Y	R	I	T	P	E	G	I	K	Y	Y	K	Q	K	C
Template Known Secondary structure													.																	T	T	S																		T	T	S
Template Predicted Secondary structure													.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		86	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		92	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions