Job Description P37309 Confidence 98.27% Date Thu Jan 5 11:55:08 GMT 2012 Rank 64 Aligned Residues 94 % Identity 7% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		E	T	R	L	G	I	V	L	L	L	S	E	L	G	E	L	C	V	C	D	L	C	T	A	L	.	.	.	.	D	Q	S	Q	P	K	I	S	R	H	L	A	L	L	R	E	S	G	L	L	L	D	R	K	Q	G	K	W	V	H	Y	R	L	S	P	H	I	P	A	W	A	A	K	I	I	D	E	A	W	R	C
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.
Template Conservation
Template Sequence		X	A	E	W	D	V	X	N	I	I	W	D	K	K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	E	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X	K	T	A	K	T	F	L	N	K
Template Known Secondary structure														S	S	S												T	T	S																	T	T	S							T	T								S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																					92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	E	K	V	Q	A	I	V	R	N	L	A	R	Q	N	C	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	G	G	D	X	K	S	L	V	L	N	F	A	K	N	E	E	L	N	N	K	E	I	E	E	L	R	D	I	L	N	D	I	S	K	K
Template Known Secondary structure				T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions