Job Description P37309 Confidence 98.51% Date Thu Jan 5 11:55:08 GMT 2012 Rank 42 Aligned Residues 89 % Identity 17% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																				.	.	.												.
Query SS confidence																	.																																				.	.	.												.
Query Sequence		D	E	T	R	L	G	I	V	L	L	L	S	E	L	G	.	E	L	C	V	C	D	L	C	T	A	L	D	Q	S	Q	P	K	I	S	R	H	L	A	L	L	R	E	S	G	L	L	L	D	R	K	.	.	.	Q	G	K	W	V	H	Y	R	L	S	P	.	H	I	P	A	W	A	A	K	I	I	D	E	A	W
Query Conservation																	.																																				.	.	.												.
Alig confidence																	.																																				.	.	.												.
Template Conservation
Template Sequence		N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	G	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	K	D	I	A	K	R	K	H	D	L	I
Template Known Secondary structure																S	S												T																T	T	S							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	E	Q	E	K	V	Q	A	I	V	R	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	T	Y	E	D	L	K	K	L	E	E	K	C
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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