Return to main results Retrieve Phyre Job Id

Job DescriptionP37309
Confidence94.24%DateThu Jan 5 11:55:08 GMT 2012
Rank271Aligned Residues56
% Identity23%Templated1aoya_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Arginine repressor (ArgR), N-terminal DNA-binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30 .........40 . ........50.........60.........70......
Predicted Secondary structure 


.

.....
.









Query SS confidence 












.









. . . . .
.


































Query Sequence  RLGIVLLLSELGE. LCVCDLCTAL. . . . . D. QSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPH
Query Conservation 

 

  
     . 

 

   
..... . 
 
 

 

  
   


   
 

   
 
   
Alig confidence 












.









.....
.












...


















Template Conservation   
  

 

    
 

 

   
   
   









 

...  


    
   
 

 
Template Sequence  LVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKF. . . GAVRTRNAKMEMVYCLPAE
Template Known Secondary structure  T



ST
SS

...T

TTS


SS
Template Predicted Secondary structure 












...









Template SS confidence 

































































   10.........20.........30.........40.........50... ......60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions