Job Description P37309 Confidence 96.38% Date Thu Jan 5 11:55:08 GMT 2012 Rank 200 Aligned Residues 82 % Identity 18% Template c3m1eA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd Resolution 1.80 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	E	T	R	L	G	I	V	L	L	L	S	E	L	G	E	L	C	V	C	D	L	C	T	A	L	D	Q	S	Q	P	K	I	S	R	H	L	A	L	L	R	E	S	.	G	L	L	L	D	R	K	Q	G	K	W	V	H	Y	R	L	S	P	H	I	P	A	W	A	A	K	I	I	D	E	A	W	R	C	E	Q
Query Conservation																																													.
Alig confidence																	.	.																											.													.	.							.
Template Conservation																	.	.																																								.	.							.
Template Sequence		E	L	R	H	L	R	Y	F	V	A	V	V	E	E	Q	.	.	S	F	T	K	A	A	D	K	L	C	I	A	Q	P	P	L	S	R	Q	I	Q	N	L	E	E	E	L	G	I	Q	L	L	E	R	G	S	R	P	V	.	.	K	T	T	P	E	G	.	H	F	F	Y	Q	Y	A	I	K	L	L	S	N	V	D
Template Known Secondary structure																T	.	.									T	T	S																	T	S			B		T	T		S	S		.	.		B					.
Template Predicted Secondary structure																	.	.																																								.	.							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		94	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	V	Q	A	I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	M	V	S	M	T	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions