Job Description P37309 Confidence 96.98% Date Thu Jan 5 11:55:08 GMT 2012 Rank 172 Aligned Residues 88 % Identity 15% Template c1iz1B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:lysr-type regulatory protein; PDBTitle: crystal structure of cbnr, a lysr family transcriptional2 regulator Resolution 2.50 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	E	T	R	L	G	I	V	L	L	L	S	E	L	G	E	L	C	V	C	D	L	C	T	A	L	D	Q	S	Q	P	K	I	S	R	H	L	A	L	L	R	E	S	.	G	L	L	L	D	R	K	Q	G	K	W	V	H	Y	R	L	S	P	H	I	P	A	W	A	A	K	I	I	D	E	A	W	R	C	E	Q
Query Conservation																																													.
Alig confidence																	.	.																											.													.	.							.
Template Conservation																	.	.																																								.	.							.
Template Sequence		E	F	R	Q	L	K	Y	F	I	A	V	A	E	A	G	.	.	N	M	A	A	A	A	K	R	L	H	V	S	Q	P	P	I	T	R	Q	M	Q	A	L	E	A	D	L	G	V	V	L	L	E	R	S	H	R	G	I	.	.	E	L	T	A	A	G	.	H	A	F	L	E	D	A	R	R	I	L	E	L	A	G
Template Known Secondary structure																	.	.	S									T	S																	T	S							S	S	S		.	.							.
Template Predicted Secondary structure																	.	.																																								.	.							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	V	Q	A	I	V	R	N	L	A	R	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	G	D	R	S	R	A	A	A	R	G	D	V
Template Known Secondary structure													T	S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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