 |
Job Description | P37309 | Confidence | 85.81% | Date | Thu Jan 5 11:55:08 GMT 2012 |
Rank | 370 | Aligned Residues | 48 |
% Identity | 19% | Template | c1dpuA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; |
PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
|
Resolution | UNK |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | T | R | L | G | I | V | L | L | L | S | E | L | G | . |
. |
. |
E | L | C | V | C | D | L | C | T | A | L | . |
D | Q | S | Q | P | K | I | S | R | H | L | A | L | L | R | E | S | G | L | L | L | D |
Query Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|   |   |   |   | . | . | . |   |   |
|
|   |
|
|   |   |   |
| . |   |   |
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |
|
|
|
Template Sequence |   |
T | V | A | Q | N | Q | V | L | N | L | I | K | A | C | P | R | P | E | G | L | N | F | Q | D | L | K | N | Q | L | K | H | M | S | V | S | S | I | K | Q | A | V | D | F | L | S | N | E | G | H | I | Y | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|