Job Description P09378 Confidence 99.03% Date Thu Jan 5 11:02:17 GMT 2012 Rank 12 Aligned Residues 128 % Identity 14% Template d2arca_ SCOP info Double-stranded beta-helix Regulatory protein AraC Regulatory protein AraC Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	T	H	D	F	C	E	L	V	I	V	W	R	G	N	G	L	H	V	L	N	D	R	P	Y	R	I	T	R	G	D	L	F	Y	I	H	A	D	D	K	H	S	Y	A	S	V	N	D	L	V	L	Q	N	I	I	Y	C	P	E	R	L	K	L	N	L	D	W	Q	G	A	I	P	G	F	N	A	S	A	G
Query Conservation
Alig confidence																																																											.	.
Template Conservation																																																											.	.
Template Sequence		P	L	G	M	K	G	Y	I	L	N	L	T	I	R	G	Q	G	V	V	K	N	Q	G	R	E	F	V	C	R	P	G	D	I	L	L	F	P	P	G	E	I	H	H	Y	G	R	H	P	E	A	R	E	W	Y	H	Q	W	.	.	V	Y	F	R	P	R	A	Y	W	H	E	W	L	N	W	P	S	I	F	A	N
Template Known Secondary structure		T	T			S	S																T	T							T	T							T	T									T	T	S	S							.	.							G	G	G	G	G	G								T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	H	W	R	L	G	S	M	G	M	A	Q	A	R	Q	V	I	G	Q	L	E	H	E	S	S	Q	H	V	P	F	A	N	E	M	A	E	L	L	F	G	Q	L	V	M	L	L	N	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	F	F	R	P	D	E	A	H	Q	P	H	F	S	D	L	F	G	Q	I	I	N	A	G	Q	G	E	G	R	Y	S	E	L	L	A	I	N	L	L	E	Q	L	L	L	R	R	M	E	A
Template Known Secondary structure									T	T	T																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions