Return to main results Retrieve Phyre Job Id

Job DescriptionP09378
Confidence98.32%DateThu Jan 5 11:02:17 GMT 2012
Rank29Aligned Residues129
% Identity16%Templated1uika1
SCOP infoDouble-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50... ......60.........70.........80.........90.
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Query Sequence  DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVL. . . . NDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP
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Template Sequence  RDYRILEFNSKPNTLLLPHHADADYLIVILNGTAILTLVNNDDRDSYNLQSGDALRVPAGTTYYVVNPDNDENLRMITLA
Template Known Secondary structure  TT

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   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP
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Template Sequence  IPVNKPGRFESFFLSSTQAQQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSBTTB


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   265....270.........280.....
 
   172.......180.........190.........200.........210.........
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Query Sequence  TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGM
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Template Sequence  . . . . . . . . . . . . . . . . SYLQGFSKNILEASYDTKFEEINKVLFGQESV
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GGGGS
TS
TT


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   286...290.........300.........310.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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