Job Description P09378 Confidence 67.68% Date Thu Jan 5 11:02:17 GMT 2012 Rank 398 Aligned Residues 61 % Identity 13% Template c3ohwB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:phycobilisome lcm core-membrane linker polypeptide; PDBTitle: x-ray structure of phycobilisome lcm core-membrane linker polypeptide2 (fragment 721-860) from synechocystis sp. pcc 6803, northeast3 structural genomics consortium target sgr209e Resolution 2.70 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	Q	F	R	Q	Q	T	G	M	T	I	N	Q	Y	L	R	Q	V	R	V	C	H	A	Q	Y	L	L	Q	H	S	R	L	L	I	S	D	I	S	T	E	C	G	F	E	D	S	N	Y	F	S	V	V	F	T	R	E	T	G	M	T	P	S	Q	W	R
Query Conservation
Alig confidence																																															.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		I	R	A	A	Y	R	Q	V	F	E	R	D	L	E	P	Y	I	I	N	S	E	F	T	A	L	E	S	K	L	S	N	N	E	I	N	V	K	E	F	I	E	G	L	G	T	.	.	.	.	.	.	S	E	L	Y	X	K	E	F	Y	A	P	Y	P	N	T	K
Template Known Secondary structure											S	S											T									T	T	S	S											T	.	.	.	.	.	.	S								T	S	S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		739	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.							.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions