Job Description P09378 Confidence 65.71% Date Thu Jan 5 11:02:17 GMT 2012 Rank 411 Aligned Residues 72 % Identity 13% Template c3hosA_ PDB info PDB header:transferase, dna binding protein/dna Chain: A: PDB Molecule:transposable element mariner, complete cds; PDBTitle: crystal structure of the mariner mos1 paired end complex with mg Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	S	D	S	L	P	P	T	S	S	E	T	L	L	D	K	L	I	T	R	L	A	A	S	L	K	S	P	F	A	L	D	K	F	C	D	E	A	S	C	S	E	R	V	L	R	Q	Q	F	R	Q	Q	T	G	M	.	.	.	.	.	.	.	.	.	.	T	I	N	Q	Y	L	R	Q	V	R	V	C	H	A
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																									.			.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.																									.
Template Sequence		V	D	D	K	E	H	G	K	P	P	K	R	Y	E	D	A	E	L	Q	A	L	L	D	E	D	D	A	.	.	Q	T	Q	K	Q	L	A	E	Q	L	E	V	S	Q	Q	A	V	S	N	R	L	R	E	M	.	G	K	I	Q	K	V	G	R	W	V	P	H	E	L	N	E	R	Q	M	E	R	R	K	N	T	C
Template Known Secondary structure		S	S										S	S												S	S		.	.								T	T	T	T	S												T	.	T										S
Template Predicted Secondary structure																													.	.																									.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		234	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	L	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions