Job Description P09378 Confidence 68.49% Date Thu Jan 5 11:02:17 GMT 2012 Rank 394 Aligned Residues 136 % Identity 6% Template c3e6dA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: crystal structure of cprk c200s Resolution 2.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																.	.	.						.	.	.
Query SS confidence																.	.	.						.	.	.
Query Sequence		E	L	V	I	V	W	R	G	N	G	L	H	V	L	.	.	.	N	D	R	P	Y	.	.	.	R	I	T	R	G	D	L	F	Y	I	H	A	D	D	K	H	S	Y	A	S	V	N	D	L	V	L	Q	N	I	I	Y	C	P	E	R	L	K	L	N	L	D	W	Q	G	A	I	P	G	F	N	A	S	A	G	Q
Query Conservation																.	.	.						.	.	.
Alig confidence																.	.	.						.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		S	M	I	F	L	V	E	G	K	I	K	L	D	I	I	F	E	D	G	S	E	K	L	L	Y	Y	A	G	G	N	S	L	I	G	K	L	Y	P	T	G	N	N	I	Y	A	T	A	M	E	P	T	R	T	C	W	F	S	E	K	S	L	R	T	V	F	R	T	D	E	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S									T	T	S										T	T						S	S			S								S	S	S																			T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	W	R	L	G	S	M	G	M	A	Q	A	R	Q	V	I	G	Q	L	E	H	E	S	S	Q	H	V	P	F	A	N	E	M	A	E	L	L	F	G	Q	L	V	M	L	L	N	R	H	R	Y	T	S	D	S	L	P	P	T	S	S	E	T	L	L	D	K	L	I	T	R	L	A	A	S	L	K	S	P	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	M	I	F	E	I	F	K	N	Y	L	T	K	V	A	Y	Y	A	R	Q	V	P	T	I	R	I	L	R	L	F	Y	E	L	C	S	S	Q	G	K	R	V	G	D	T	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	M	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																									T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																				.	.	.	170	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	K	F	C	D	E	A	S	C	S	E	R	V	L	R	Q	Q	F	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	K	S	I	G	E	I	T	G	V	H	H	V	T	V	S	R	V	L	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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