Return to main results Retrieve Phyre Job Id

Job DescriptionP09378
Confidence60.21%DateThu Jan 5 11:02:17 GMT 2012
Rank446Aligned Residues47
% Identity15%Templatec2xxzA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:lysine-specific demethylase 6b; PDBTitle: crystal structure of the human jmjd3 jumonji domain
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........
Predicted Secondary structure 































Query SS confidence 














































Query Sequence  LNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLD
Query Conservation         
  
    
     
                         
Alig confidence 














































Template Conservation 


    
 


 
   

  
 
 
 
   
 



          
Template Sequence  IPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQL
Template Known Secondary structure 



TT

TT
SSSS
TTGGGGG
Template Predicted Secondary structure 


















Template SS confidence 














































   1446...1450.........1460.........1470.........1480.........1490..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions