Job Description P09378 Confidence 87.18% Date Thu Jan 5 11:02:17 GMT 2012 Rank 230 Aligned Residues 161 % Identity 7% Template c2gauA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family; PDBTitle: crystal structure of transcriptional regulator, crp/fnr family from2 porphyromonas gingivalis (apc80792), structural genomics, mcsg Resolution 1.90 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	P	Y	R	I	T	R	G	D	L	F	Y	I	H	A	D	D	K	H	S	Y	A	S	V	N	D	L	V	L	Q	N	I	I	Y	C	P	E	R	L	K	L	N	L	D	W	Q	G	A	I	P	G	F	N	A	S	A	G	Q	P	H	W	R	L	G	S	M	G	M	A	Q	A	R	Q	V	I	G	Q	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	P	F	P	C	K	K	A	S	T	V	F	S	E	G	D	I	P	N	N	L	F	Y	L	Y	E	G	K	I	K	I	L	R	R	F	H	I	S	R	I	V	K	P	G	Q	F	F	G	M	R	P	Y	F	A	E	E	T	C	S	S	T	A	I	A	V	E	N	S	K	V	L	A	I	P	V	E	A	I	E
Template Known Secondary structure									T	T						T	T												S																T	T				S							T	S			S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		H	E	S	S	Q	H	V	P	F	A	N	E	M	A	E	L	L	F	G	Q	L	V	M	L	L	N	R	H	R	Y	T	S	D	S	L	P	P	T	S	S	E	T	L	L	D	K	L	I	T	R	L	A	A	S	L	K	S	.	.	.	.	.	P	F	A	L	D	K	F	C	D	E	A	S	C	S	E	R	V	L
Query Conservation																																																											.	.	.	.	.
Alig confidence																																																											.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	K	G	N	T	S	F	C	R	Y	F	L	K	A	L	A	K	E	L	G	Y	A	E	R	R	T	V	T	L	T	Q	K	H	V	R	G	R	L	A	E	T	L	L	I	L	K	E	N	F	G	F	E	N	D	G	A	T	L	S	I	Y	L	S	R	E	E	L	A	T	L	S	N	M	T	V	S	N	A
Template Known Secondary structure																																			S																			B		T	T	S	S	B	B	S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Q	F	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	T	L	S	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions