Job Description P09378 Confidence 86.72% Date Thu Jan 5 11:02:17 GMT 2012 Rank 238 Aligned Residues 80 % Identity 9% Template c1zkgB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family (tm1030)2 from thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		T	S	S	E	T	L	L	D	K	L	I	T	R	L	A	A	S	L	K	S	P	F	A	L	D	K	F	C	D	E	A	S	C	S	E	R	V	L	R	Q	Q	F	R	Q	Q	T	G	M	.	.	.	T	I	N	Q	Y	L	R	Q	V	R	V	C	H	A	Q	Y	L	L	Q	H	S	R	L	L	I	S	D	I	S
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		S	K	R	D	A	I	L	K	A	A	V	E	V	F	G	K	K	G	Y	D	R	A	T	T	D	E	I	A	E	K	A	G	V	A	K	G	L	I	F	H	Y	F	K	N	K	E	E	L	Y	Y	Q	A	Y	X	S	V	T	E	K	L	Q	K	E	F	E	N	F	L	X	K	N	R	N	R	D	I	F	D	F	X
Template Known Secondary structure																																	T	S									S	S	S																												T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		249	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		83	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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