Job Description P09378 Confidence 99.94% Date Thu Jan 5 11:02:17 GMT 2012 Rank 2 Aligned Residues 104 % Identity 25% Template c1d5yD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:rob transcription factor; PDBTitle: crystal structure of the e. coli rob transcription factor2 in complex with dna Resolution 2.70 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	T	L	L	D	K	L	I	T	R	L	A	A	S	L	K	S	P	F	A	L	D	K	F	C	D	E	A	S	C	S	E	R	V	L	R	Q	Q	F	R	Q	Q	T	G	M	T	I	N	Q	Y	L	R	Q	V	R	V	C	H	A	Q	Y	L	L	Q	H	S	R	L	L	I	S	D	I	S	T	E	C	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	G	I	I	R	D	L	L	I	W	L	E	G	H	L	D	Q	P	L	S	L	D	N	V	A	A	K	A	G	Y	S	K	W	H	L	Q	R	M	F	K	D	V	T	G	H	A	I	G	A	Y	I	R	A	R	R	L	S	K	S	A	V	A	L	R	L	T	A	R	P	I	L	D	I	A	L	Q	Y	R	F
Template Known Secondary structure														T	T	T	S	S	S	S				T	T	T	T	T	T	T	S	S														S	S																																T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	S	N	Y	F	S	V	V	F	T	R	E	T	G	M	T	P	S	Q	W	R	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	Q	Q	T	F	T	R	A	F	K	K	Q	F	A	Q	T	P	A	L	Y	R	R	S
Template Known Secondary structure		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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