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Job DescriptionP64596
Confidence45.96%DateThu Jan 5 12:09:48 GMT 2012
Rank4Aligned Residues69
% Identity13%Templatec2qfiB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:ferrous-iron efflux pump fief; PDBTitle: structure of the zinc transporter yiip
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100.........110...... ...120.........130.........140........
Predicted Secondary structure 








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Query Sequence  LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQP. . . . . . . . . . . . IGLGEASNDTWITTKVRSQLLTSDLVKSSNVK
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Template Sequence  LLDRALPDEERQEIIDIVTSWPGVSGAHD. LRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIH
Template Known Secondary structure  SS




TTTTSSS
S
B

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TTS

B

BS
TTTTTT
S
GGGGTTSSS

S

B

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   205....210.........220.........230... ......240.........250.........260.........270.........280...
 
   149150
Predicted Secondary structure 
Query SS confidence 

Query Sequence  VT
Query Conservation 
 
Alig confidence 

Template Conservation   
Template Sequence  QD
Template Known Secondary structure  B
Template Predicted Secondary structure 
Template SS confidence 

   284.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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