Job Description Q46819 Confidence 98.98% Date Thu Jan 5 12:34:44 GMT 2012 Rank 36 Aligned Residues 90 % Identity 16% Template c2fugC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	I	I	V	N	P	A	D	C	I	G	C	R	T	C	E	V	A	C	V	V	A	H	P	S	E	Q	E	L	N	A	D	V	F	L	P	R	L	K	V	Q	R	L	D	S	I	S	A	P	V	M	C	H	Q	C	E	N	A	P	C	V	G	A	C	P	V	G	A	L	T	M	G	E	Q	V	V	Q	T
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	F	V	I	L	D	R	E	R	C	I	H	C	K	R	C	V	R	Y	F	E	E	V	P	G	D	E	V	L	D	F	I	E	R	G	V	H	T	F	I	G	T	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	S					S															T	T								B	S		G	G	G		B				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		N	S	A	R	C	I	G	C	Q	S	C	V	S	A	C	P	F	G	M	I	T	.	.	.	.	.	I	Q	S	L	P	G	D	T	R	Q	Q	I	V	K	C	D	L	C	E	Q	R	E	E	G	P	A
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.																				.	.
Template Conservation																																															.	.
Template Sequence		F	G	L	P	S	G	F	S	G	N	I	T	D	I	C	P	V	G	A	L	L	D	L	T	A	R	F	R	A	R	N	W	E	M	E	E	T	P	T	T	C	A	L	C	P	.	.	V	G	C	G	I
Template Known Secondary structure		T	T			S	S			T							S	S	S	S	S	B		G	G	G	S	S	S			T	T	T	S									S	S	T	.	.	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions