Job Description Q46819 Confidence 100.00% Date Thu Jan 5 12:34:44 GMT 2012 Rank 1 Aligned Residues 154 % Identity 31% Template c1kqfB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	V	N	P	A	D	C	I	G	C	R	T	C	E	V	A	C	V	V	A	H	P	S	E	Q	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	D	V	F	L	P	R	L	K	V	Q	R	L	D	S	I	S	A	P	V	M	C	H	Q	C	E	N	A	P	C	V	G	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	I	D	V	S	T	C	I	G	C	K	A	C	Q	V	A	C	S	E	W	N	D	I	R	D	E	V	G	H	C	V	G	V	Y	D	N	P	A	D	L	S	A	K	S	W	T	V	M	R	F	S	E	T	E	Q	N	G	K	L	E	W	L	I	R	K	D	G	C	M	H	C	E	D	P	G	C	L	K	A
Template Known Secondary structure						T	T	T																T									S	S	S	S			S	S	S		B	T	T	B	S										T	T	S	S									S				B	S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		67	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure										.	.																																																		.	.	.
Query SS confidence										.	.																																																		.	.	.
Query Sequence		C	P	V	G	A	L	T	M	.	.	G	E	Q	V	V	Q	T	N	S	A	R	C	I	G	C	Q	S	C	V	S	A	C	P	F	G	M	I	T	I	Q	S	L	P	G	D	T	R	Q	Q	I	V	K	C	D	L	C	E	Q	R	.	.	.	E	E	G	P	A	C	V	E	S	C	P	T	Q	A	L	Q	L	L
Query Conservation										.	.																																																		.	.	.
Alig confidence										.	.																																				.	.	.	.											.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		C	P	S	A	G	A	I	I	Q	Y	A	N	G	I	V	D	F	Q	S	E	N	C	I	G	C	G	Y	C	I	A	G	C	P	F	N	I	P	R	L	N	K	E	D	N	R	.	.	.	.	V	Y	K	C	T	L	C	V	D	R	V	S	V	G	Q	E	P	A	C	V	K	T	C	P	T	G	A	I	H	F	G
Template Known Secondary structure				S	T	T	S					T	T	S						G	G	G												T	T							T	T	T	T		.	.	.	.						T	T					T	T	T										T	T	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	R	E	L	R	R	V	R	Q	Q	R	I	V	A	S	G	E	N	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	K	E	M	L	E	L	A	E	Q	R	V	A	K	L	K	A	R	G	Y
Template Known Secondary structure																				T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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