|   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |
|
| . | . |
|
|  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | H | T | L | R | Q | Q | I | L | A | D | L | F | G | Q | V | T | . |
. |
E | A | Y | I | E | P | T | F | R | C | D | Y | G | Y | N | I | F | L | G | N | . |
. |
N | F | F | A | N | F | D | C | V | M | L | D | V | C | P | I | R | I | G | D | N | C | M | L | A | P | G | V | H | I | Y | T | A | T | H | P | I | D | P |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|   | . | . |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   | . | . |
|   |   |   |   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |
| . | . |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
Template Sequence |   |
N | N | E | I | R | K | K | I | Y | Q | K | I | S | E | N | G | F | K | I | V | N | L | I | H | K | S | A | L | . |
. |
I | S | P | S | A | I | V | E | E | N | A | G | I | L | I | M | P | Y | V | V | I | . |
. |
N | A | K | A | K | I | E | K | G | V | I | L | N | T | S | S | V | I | E | H | E | C | V | I | G | E | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
|
|  |  |
| T | T |
|  | . | . |  |
| T | T | S |  |  |
| T | T | S |
|
|  |  |
| T | T |
|  |  | . | . |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  | . | . |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  | . | . |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | R | N | S | G | A | E | L | G | K | P | V | T | I | G | N | N | V | W | I | G | G | R | A | V | I | N | P | G | V | T | I | G | D | N | V | V | V | A | S | G | A | V | V | T | K | D | V | P | D | N | V | V | V | G | G | N | P | A | R | I | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|   |
|
Template Sequence |   |
S | H | V | S | V | G | A | K | C | A | G | N | V | K | I | G | K | N | C | F | L | G | I | N | S | C | V | L | P | N | L | S | L | A | D | D | S | I | L | G | G | G | A | T | L | V | K | N | Q | D | E | K | G | V | F | V | G | V | P | A | K | R | M |
Template Known Secondary structure |   |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S |
| B |
| S |
|
|  |  |
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |