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Job DescriptionP0A6H1
Confidence99.52%DateThu Jan 5 11:03:08 GMT 2012
Rank58Aligned Residues228
% Identity21%Templated1w5sa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130...... ...140......
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Query Sequence  DYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLL. . . . . . . . . DVPFTMADAT
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Template Sequence  PELRVRRGEAEALARIY. . . . . . LNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAF
Template Known Secondary structure  SS
SSS
......TSS
B


TT

SSSTT

GG
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   22.......30........ .40.........50.........60.........70.........80.........90.....
 
   147..150 .........160.........170.........180.........190.........200.........210.
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Query Sequence  TLTE. . . . . . . . . . . . . . . AGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL
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Template Sequence  NAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNL. . . YVENHYLLVILDEFQSMLSSPRIA. . . . . . . . AEDLYTL
Template Known Secondary structure  G

ST




TT

...T
STS
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   96...100.........110.........120.........130... ......140.........150....... ..160....
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  LKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVE
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Template Sequence  LRVHE. . . . . . . EIPSRDGVNRIGFLLVASDVRALSYMRE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T.......S

TTS

BT........................................
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   165.... 170.........180.........190.......
 
   292.......300.........310.........320.........330.........340.........350.........360... .....
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Query Sequence  PEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAM. . . ARKTG
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Template Sequence  . . . . . . . . KIPQVESQIGFKLHLPAYKSRELYTIL. . . . . . . . . . . EQRAELGLRDTVWEPRHLELISDVYGEDKGGDGS
Template Known Secondary structure  ........
TT
S





...........B
TTS


GGGTS


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   198.200.........210.........220.... .....230.........240.........250........
 
   369370.........380......
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Query Sequence  ARGLRSIVEAALLDTMYD
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Template Sequence  ARRAIVALKMACEMAEAM
Template Known Secondary structure  T
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   259260.........270......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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