Job Description P0A6H1 Confidence 100.00% Date Thu Jan 5 11:03:08 GMT 2012 Rank 6 Aligned Residues 245 % Identity 25% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		H	E	I	R	N	H	L	D	D	Y	V	I	G	Q	E	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	D	T	S	N	G	V	E	L	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	.	.	.	D	V	P	F	T	M	A	D
Query Conservation																																																																							.	.	.
Alig confidence																											.	.	.	.	.	.																																							.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		L	N	M	E	N	I	L	H	S	R	V	I	G	Q	D	E	A	V	V	A	V	A	K	A	V	.	.	.	.	.	.	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	M	I	R	I	D
Template Known Secondary structure			T							T	T	S		S													.	.	.	.	.	.				T	T	T		S		T	T	S		S							S		T	T	S	S														S		T	T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.							.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	T	L	T	E	A	G	Y	V	G	E	D	V	E	N	I	I	Q	K	L	L	Q	K	C	D	Y	D	V	Q	K	A	Q	R	G	I	V	Y	I	D	E	I	D	K	I	S	R	K	S	D	N	P	S	I	T	R	D	V	S	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	T	V	A	A	V	P	P
Query Conservation
Alig confidence									.					.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation									.					.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		M	S	E	Y	M	E	K	.	H	S	T	S	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	K	V	R	R	K	P	Y	S	V	V	L	L	D	A	I	E	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	V	F	N	I	L	L	Q	V	L	E	.	.	.	.	.	.	.	D
Template Known Secondary structure		G	G	G	G		S	S	.					.	.	.	.	.	.	.	.	.	.	.	.									S	S	S							G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Predicted Secondary structure									.					.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		574	.	.	.	.	.	580		.	.	.	.													.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.															.	.	.	.	610	.	.	.	.	.	.	.	.								.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	G	R	K	H	P	Q	Q	E	F	L	Q	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D	K	V	I	S	H	R	V	E	T	G	S	G	I	G	F	G	A	T	V	K	A	K	S	D	K	A	S	E	G	E	L	L	A	Q	V	E	P	E	D	L	I	K	F	G	L	I	P	E	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		G	R	L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	S	E	K	D	K	V	M	G	E	L	K	R	A	.	.	.	.	.	.	.	.	.	F	R	P	E	F
Template Known Secondary structure		S	B					B		T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T													.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.																																	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670										.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	R	L	P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	E	F	R	D	E	A	L	D	A	I	A	K	K	A	M	A	R	K	T	G	A	R	G	L	R	S	I	V	E	A	A	L	L	D	T	M
Query Conservation
Alig confidence															.	.								.	.	.	.
Template Conservation															.	.								.	.	.	.
Template Sequence		I	N	R	I	D	E	I	I	V	F	H	E	K	.	.	K	H	L	T	E	I	V	.	.	.	.	S	L	M	S	D	Q	L	T	K	R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P	L	R	R	A	I	Q	K	H	V	E	D	R	L
Template Known Secondary structure			T	T	S	S									.	.								.	.	.	.													T	T	T															G	G	G			T	T	T	T	T	T	T									T
Template Predicted Secondary structure															.	.								.	.	.	.
Template SS confidence
		702	.	.	.	.	.	.	.	710	.	.	.	.			.	.	.	.	.	720	.					.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.
		385	.	.	.				.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		Y	D	L	P	.	.	.	S	M	E	D	V	E	K	V	V	I	D
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		S	E	E	L	L	R	G	N	I	H	K	G	Q	H	I	V	L	D
Template Known Secondary structure							T	T		S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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