Job Description P0A6H1 Confidence 97.04% Date Thu Jan 5 11:03:08 GMT 2012 Rank 250 Aligned Residues 86 % Identity 26% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.
Predicted Secondary structure																	.	.	.	.	.																		.	.																																						.	.	.
Query SS confidence																	.	.	.	.	.																		.	.																																						.	.	.
Query Sequence		H	E	I	R	N	H	L	D	D	Y	V	I	G	Q	E	.	.	.	.	.	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	.	.	R	N	G	D	T	S	N	G	V	E	L	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	.	.	.	D
Query Conservation																	.	.	.	.	.																		.	.																																						.	.	.
Alig confidence																	.	.	.	.	.																		.	.																																						.	.	.
Template Conservation
Template Sequence		L	K	M	S	K	E	I	E	R	R	A	L	E	E	K	T	P	K	G	L	S	K	K	E	H	I	I	K	I	V	Y	E	E	L	V	K	L	L	G	E	E	A	K	K	L	E	L	N	P	K	K	Q	N	V	I	L	L	V	G	I	Q	G	S	G	K	T	T	T	A	A	K	L	A	R	Y	I	Q	K	R	G
Template Known Secondary structure					T								S	S	S		S	S		S	S																					S								S	S	S										S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	F	T	M	A	D	A	T	T	L	T	E	A	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y
Template Known Secondary structure										S				T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions