Job Description P0A6H1 Confidence 99.59% Date Thu Jan 5 11:03:08 GMT 2012 Rank 52 Aligned Residues 197 % Identity 18% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		74	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																																																									.	.	.
Query SS confidence									.	.																																																									.	.	.
Query Sequence		L	D	D	Y	V	I	G	.	.	Q	E	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	D	T	S	N	G	V	E	L	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	.	.	.	D	V	P	F	T	M	A	D	A	T	T	L
Query Conservation									.	.																																																									.	.	.
Alig confidence									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	N	F	I	V	G	E	G	N	R	L	A	Y	E	V	V	K	E	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S	S	A	D	D	F
Template Known Secondary structure		S	S	S	S				T	T	T										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	S									S	S	S	S	S															T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.														.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	G	Y	V	G	E	D	V	E	N	I	I	Q	K	L	L	Q	K	C	D	Y	D	V	Q	K	A	Q	R	G	I	V	Y	I	D	E	I	D	K	I	S	R	K	S	D	N	P	S	I	T	R	D	V	S	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	T	V	A	A	V	P	P	Q	G	G	R
Query Conservation
Alig confidence					.																		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation					.																		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		A	Q	A	.	M	V	E	H	L	K	K	G	T	I	N	E	F	R	N	M	Y	.	.	.	.	.	.	K	S	V	D	L	L	L	L	D	D	V	Q	F	L	S	G	K	.	.	.	.	.	.	.	.	.	.	.	.	E	R	T	Q	I	E	F	F	H	I	F	N	T	L	Y	L	L	.	.	.	.	.	.	.
Template Known Secondary structure					.								T										.	.	.	.	.	.		T		S							G	G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	S																T	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		152	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.													.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	P	Q	Q	E	F	L	Q	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D	K	V	I	S	H	R	V	E	T	G	S	G	I	G	F	G	A	T	V	K	A	K	S	D	K	A	S	E	G	E	L	L	A	Q	V	E	P	E	D	L	I	K	F	G	L	I	P	E	F	I	G	R	L
Query Conservation
Alig confidence		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	E	K	Q	I	I	L	A	S	D	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	K	L	D	G	V	S	D	R	L	V	S	R	F	E	G
Template Known Secondary structure		.	.	.	.	T								S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		T	T	S
Template Predicted Secondary structure		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						206	.	.	.	210	.	.	.	.	.	.																																																	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	E	F	R	D	E	A	L	D	A	I	A	K	K	A	M	A	R	K	T	G	A	R	G	L	R	S	I	V	E	A	A
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		G	I	L	V	E	I	E	L	D	N	K	T	R	F	K	I	I	K	E	K	L	K	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	E	L	R	K	E	V	I	D	Y	L	L	E	N	T	.	.	.	.	K	N	V	R	E	I	E	G	K	I	K	L	I
Template Known Secondary structure		S									S														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																.	.	.	.		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.															.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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