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Job DescriptionP27550
Confidence100.00%DateThu Jan 5 11:44:02 GMT 2012
Rank1Aligned Residues633
% Identity95%Templated1pg4a_
SCOP infoAcetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  HKHTIPANIADRCLINPQQYEAMYQQSINVPDTFWGEQGKILDWIKPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDR
Query Conservation                        
       
                                        
    
   
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Template Conservation                     
  

      
                                        
     
  
Template Sequence  HKHAIPANIADRCLINPEQYETKYKQSINDPDTFWGEQGKILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDR
Template Known Secondary structure 

B



SS

GGGS

SB

S



TT

STT

TGG
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  HLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRFANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFG
Query Conservation   
   

  

            


 

   
  

  
   

  

 
 
   
  
 


 

    

  


  
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Template Conservation   
   

  


           


 

   
  

  
   

  

 
 
    
    

 

    
   


  
Template Sequence  HLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFG
Template Known Secondary structure  GTTS
SSTT
T

TT


SST


T
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  GFSPEAVAGRIIDSNSRLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDLVEQA
Query Conservation        
   
       

                                                            
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Template Conservation        
   
       

                                
                           
Template Sequence  GFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKA
Template Known Secondary structure  TS
T
SSTTSTSTT

S


SS






BTTTTS
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  SDQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACG
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Template Sequence  SPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACG
Template Known Secondary structure 
S





TTS

SSSS
STT

TT

S
TTSTTTT
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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  ATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGN
Query Conservation     
                 
    

     
     
            
  

    


 
              
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Template Conservation     
             
   
    

     
     
            
   
     
                 
Template Sequence  ATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGK
Template Known Secondary structure 

S
TTSSSTTT
S
TTGGGGTTT


TT

SS


TTT
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   325....330.........340.........350.........360.........370.........380.........390.........400....
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  EKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERF
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Template Conservation      
   

 

                                         
  


 
 
               
Template Sequence  EKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERF
Template Known Secondary structure  T
S
B

GGGSS
SB


TTT

B
TT

BSB
TT


TT

B

SS
S

TT


TT
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   405....410.........420.........430.........440.........450.........460.........470.........480....
 
   485....490.........500.........510.........520.........530.........540.........550.........560....
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Query Sequence  EQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHNIKGQAIYAYVT
Query Conservation           
 
 


      

 
   

 

 

  
 

   


  
   
 
  
 

       
  
 
 

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Template Conservation               


      

 
   

 

 

  
 

   


  
   
 
  
 
           


 

Template Sequence  EQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVT
Template Known Secondary structure  SSSTTS
TTS
SSSTTSTTTTT
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   485....490.........500.........510.........520.........530.........540.........550.........560....
 
   565....570.........580.........590.........600.........610.........620.........630.........640....
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Query Sequence  LNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEE
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Template Conservation                
   
   
     
  
  
  

 
  




  
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Template Sequence  LNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD. . . . . . . . . . ADPGVVEKLLEE
Template Known Secondary structure 
TT



T
GGG

S
S


B
TTS
B
T
..........

TT
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   565....570.........580.........590.........600.........610.........620.. .......630....
 
   645..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  KQA
Query Conservation     
Alig confidence 


Template Conservation     
Template Sequence  KQA
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 


   645..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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