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Job DescriptionP27550
Confidence100.00%DateThu Jan 5 11:44:02 GMT 2012
Rank8Aligned Residues528
% Identity20%Templated1mdba_
SCOP infoAcetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  LDWIKPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRFANTLL
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Template Sequence  LKGFTPWPDELAETYRKNGCWAGE. . . . . . . TFGDLLRDRAAKYGDRIAIT. . . . . . CGNTHWSYRELDTRADRLAAGFQ
Template Known Secondary structure 
TT




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S
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   2.......10.........20..... ....30.........40..... ....50.........60........
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
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Query Sequence  ELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSNSRLVITSDEGVRAGRSIPLKKNVDDA
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Template Sequence  KLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSK.
Template Known Secondary structure  T

TT



SST


TT

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   6970.........80.........90.........100.........110.........120.........130.........140.......
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  LKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDLVEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYA
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Template Sequence  . . . . . . . . . . . . . . . . LPTLKNIIVAGEAEEFLPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSL
Template Known Secondary structure  ................
TT


S

TTSGGG











TTS


SSSS

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   148.150.........160.........170.........180.........190.........200.........210.
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  ALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALM
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Template Sequence  KR. SVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPS. . . PSPDDAFPLIEREKVTITALVPPLAMVWM
Template Known Secondary structure  .T

TT

S
TTSSSTT

SS...SST
S
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   212. ......220.........230.........240.........250........ .260.........270.........280.......
 
   366...370.........380.........390.........400.........410.........420.........430.........440.....
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Query Sequence  AEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQ
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Template Sequence  DAASSR. . RDDLSSLQVLQVGGAKFSAEAARRVKAVF. . . GCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDE
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TT

SS


TTT...
S
TTS


TTS



SSTT
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   288.290... ......300.........310.........320.. .......330.........340.........350.........360..
 
   446...450.........460.........470.........480.........490.........500.........510.........520.....
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Query Sequence  PALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGH
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Template Sequence  SRVWDDHDRDVKPGETGHLLTRGPY. . TIRGYYKAEEHNAASF. . TEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGE
Template Known Secondary structure 
TTS
B

TT


TT..S
SS
TT
B..
TTS

TTS
GGG

SS
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   363......370.........380....... ..390.........400... ......410.........420.........430........
 
   526...530.........540.........550.........560.........570.........580...... ...590.........600....
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Query Sequence  RLGTAEIESALVAHPKIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKE. IGPLATPDVLHWTDSLPK
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Template Sequence  KVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKA. . . . AELKAFLRERGLAAYKIPDRVEFVESFPQ
Template Known Secondary structure 
TTSTTTTTSSS


....TT

GGGS
S
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B
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   439440.........450.........460.........470.........480..... ....490.........500.........510....
 
   605....610.........620
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Query Sequence  TRSGKIMRRILRKIAA
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Template Sequence  TGVGKVSKKALREAIS
Template Known Secondary structure 
TTS
B
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   515....520.........530
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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