Job Description P27550 Confidence 8.78% Date Thu Jan 5 11:44:02 GMT 2012 Rank 97 Aligned Residues 75 % Identity 9% Template d1iwga3 SCOP info Ferredoxin-like Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Resolution 3.50

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Show / Hide Conservation and Alignment quality

		529	530	.	.	.	.			.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.			.	.	560	.	.	.	.	.	.	.	.	.	570	.	.			.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.		.	600	.
Predicted Secondary structure								.	.																								.	.																.	.																											.
Query SS confidence								.	.																								.	.																.	.																											.
Query Sequence		T	A	E	I	E	S	.	.	A	L	V	A	H	P	K	I	A	E	A	A	V	V	G	I	P	H	N	I	K	G	Q	.	.	A	I	Y	A	Y	V	T	L	N	H	G	E	E	P	S	.	.	P	E	L	Y	A	E	V	R	N	W	V	R	K	E	I	G	P	L	A	T	P	D	V	L	H	W	.	T	D	S
Query Conservation								.	.																								.	.																.	.																											.
Alig confidence								.	.																								.	.																.	.																											.
Template Conservation
Template Sequence		L	N	E	V	T	H	Y	Y	L	T	K	E	K	N	N	V	E	S	V	F	A	V	N	G	F	G	F	A	G	R	G	Q	N	T	G	I	A	F	V	S	L	K	D	W	A	D	R	P	G	E	E	N	K	V	E	A	I	T	M	R	A	T	R	A	F	S	Q	I	K	D	A	M	V	F	A	F	N	L	P	A
Template Known Secondary structure												T	T	T	T	T												S	S																G	G	G			S	T	T	S	S															S		S	S									S
Template Predicted Secondary structure
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
		602	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		671	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions