Job Description P27550 Confidence 100.00% Date Thu Jan 5 11:44:02 GMT 2012 Rank 10 Aligned Residues 502 % Identity 22% Template c3ni2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:4-coumarate:coa ligase; PDBTitle: crystal structures and enzymatic mechanisms of a populus tomentosa 4-2 coumarate:coa ligase Resolution 1.90 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	N	C	L	D	R	H	L	Q	E	N	G	D	R	T	A	I	I	W	E	G	D	D	A	S	Q	S	K	H	I	S	Y	K	E	L	H	R	D	V	C	R	F	A	N	T	L	L	E	L	G	I	K	K	G	D	V	V	A	I	Y	M	P	M	V	P	E	A	A	V	A	M	L	A	C	A	R	I	G
Query Conservation
Alig confidence																							.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		P	L	H	S	Y	V	L	E	N	L	S	N	H	S	S	K	P	C	L	I	N	.	.	.	.	G	A	N	G	D	V	Y	T	Y	A	D	V	E	L	T	A	R	R	V	A	S	G	L	N	K	I	G	I	Q	Q	G	D	V	I	M	L	F	L	P	S	S	P	E	F	V	L	A	F	L	G	A	S	H	R	G
Template Known Secondary structure								T	T	T	G	G	G	S	T	T	S						.	.	.	.	T	T	T																							T	T			T	T									S	S														T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	H	S	V	I	F	G	G	F	S	P	E	A	V	A	G	R	I	I	D	S	N	S	R	L	V	I	T	S	D	E	G	V	R	A	G	R	S	I	P	L	K	K	N	V	D	D	A	L	K	N	P	N	V	T	S	V	E	H	V	V	V	L	K	R	T	G	G	K	I	D	W	Q	E	G	R	D	L	W
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	I	T	A	A	N	P	F	S	T	P	A	E	L	A	K	H	A	K	A	S	R	A	K	L	L	I	T	Q	A	C	Y	Y	E	K	V	K	D	F	A	R	E	S	D	V	K	V	M	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	S	A	P	D	G	C	L	H
Template Known Secondary structure									T	T														T								G	G	G	T											T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S				T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																					.	150	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		W	H	D	L	V	E	Q	A	S	D	Q	H	Q	A	E	E	M	N	A	E	D	P	L	F	I	L	Y	T	S	G	S	T	G	K	P	K	G	V	L	H	T	T	G	G	Y	L	V	Y	A	A	L	T	F	K	.	.	.	Y	V	F	D	Y	H	P	G	D	I	Y	W	C	T	A	D	V	G	W	V	T	G	H
Query Conservation																																																								.	.	.
Alig confidence																																																								.	.	.
Template Conservation
Template Sequence		F	S	E	L	T	Q	A	D	E	N	E	A	P	Q	V	D	I	S	P	D	D	V	V	A	L	P	Y	S	S	G	T	T	G	L	P	K	G	V	M	L	T	H	K	G	L	I	T	S	V	A	Q	Q	V	D	G	D	N	P	N	L	Y	F	H	S	E	D	V	I	L	C	V	L	P	M	F	H	I	Y	A	L
Template Known Secondary structure		T					T	S		G	G	G								T	T	S									T	T	S	S	S																					S	S	S		S	S				T	T							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	L	L	Y	G	P	L	A	C	G	A	T	T	L	M	F	E	G	V	P	N	W	P	T	P	A	R	M	A	Q	V	V	D	K	H	Q	V	N	I	L	Y	T	A	P	T	A	I	R	A	L	M	A	E	G	D	K	A	I	E	G	T	D	R	S	S	L	R	I	L	G	S	V	G	E	P	I	N	P	E
Query Conservation
Alig confidence																		.	.	.	.																																							.	.
Template Conservation																		.	.	.	.																																							.	.
Template Sequence		N	S	I	M	L	C	G	L	R	V	G	A	P	I	L	I	.	.	.	.	M	P	K	F	E	I	G	S	L	L	G	L	I	E	K	Y	K	V	S	I	A	P	V	V	P	P	V	M	M	S	I	A	K	S	P	D	L	D	.	.	K	H	D	L	S	S	L	R	M	I	K	S	G	G	A	P	L	G	K	E
Template Known Secondary structure				T								T						.	.	.	.		S	S														T																T		S		G	G	.	.	G	S			T	T								S	S
Template Predicted Secondary structure																		.	.	.	.																																							.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																											.
Query SS confidence																																			.	.	.																											.
Query Sequence		A	W	E	W	Y	W	K	K	I	G	N	E	K	C	P	V	V	D	T	W	W	Q	T	E	T	G	G	F	M	I	T	P	L	.	.	.	P	G	A	T	E	L	K	A	G	S	A	T	R	P	F	F	G	V	Q	P	A	L	V	D	N	E	.	G	N	P	L	E	G	A	T	E	G	S	L	V	I	T	D	S
Query Conservation																																			.	.	.																											.
Alig confidence											.	.																							.	.	.																											.
Template Conservation											.	.
Template Sequence		L	E	D	T	V	R	A	K	F	.	.	P	Q	A	R	L	G	Q	G	Y	G	M	T	E	A	G	P	V	L	A	M	C	L	A	F	A	K	E	P	F	D	I	K	P	G	A	C	G	T	V	V	R	N	A	E	M	K	I	V	D	P	E	T	G	A	S	L	P	R	N	Q	P	G	E	I	C	I	R	G	D
Template Known Secondary structure											.	.	T	T	S									G	G	G	S	S						G	G	G	S	S	S						T	T							S	S								T	T	T			B			T	T									S	T
Template Predicted Secondary structure											.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	G	Q	A	R	T	L	F	G	D	H	E	R	F	E	Q	T	Y	F	S	T	F	K	N	M	Y	F	S	G	D	G	A	R	R	D	E	D	G	Y	Y	W	I	T	G	R	V	D	D	V	L	N	V	S	G	H	R	L	G	T	A	E	I	E	S	A	L	V	A	H	P	K	I	A	E	A	A	V	V	G
Query Conservation
Alig confidence			.	.																	.	.
Template Conservation			.	.																	.	.
Template Sequence		Q	.	.	I	M	K	G	Y	L	N	D	P	E	A	T	S	R	T	I	.	.	D	K	E	G	W	L	H	T	G	D	I	G	Y	I	D	D	D	D	E	L	F	I	V	D	R	L	K	E	L	I	K	Y	K	G	F	Q	V	A	P	A	E	L	E	A	L	L	I	A	H	P	E	I	S	D	A	A	V	V	G
Template Known Secondary structure		T	.	.	S		S			T	T									B	.	.		T	T	S												T	T	S									S						T	T														T	S	T	T
Template Predicted Secondary structure			.	.																	.	.
Template SS confidence
		391			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	H	N	I	K	G	Q	A	I	Y	A	Y	V	T	L	N	H	G	E	E	P	S	P	E	L	Y	A	E	V	R	N	W	V	R	K	E	I	G	P	L	A	T	P	D	V	L	H	W	T	D	S	L	P	K	T	R	S	G	K	I	M	R	R	I	L	R	K
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		L	K	D	E	D	A	G	E	V	P	V	A	F	V	V	K	S	E	K	S	Q	A	T	.	.	.	E	D	E	I	K	Q	Y	I	S	K	Q	V	I	F	Y	K	R	I	K	R	V	F	F	I	E	A	I	P	K	A	P	S	G	K	I	L	R	K	N	L	K	E
Template Known Secondary structure					T	T	T												T	T					.	.	.										T	T	S		G	G	G			S						S				B		T	T	S		B							T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.				490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.