Job Description P27550 Confidence 100.00% Date Thu Jan 5 11:44:02 GMT 2012 Rank 12 Aligned Residues 516 % Identity 17% Template c3kxwA_ PDB info PDB header:ligase Chain: A: PDB Molecule:saframycin mx1 synthetase b; PDBTitle: the crystal structure of fatty acid amp ligase from legionella2 pneumophila Resolution 1.85 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	N	C	L	D	R	H	L	Q	E	N	G	D	R	T	A	I	I	W	E	G	D	D	A	S	Q	S	K	H	I	S	Y	K	E	L	H	R	D	V	C	R	F	A	N	T	L	L	E	L	G	I	K	K	G	D	V	V	A	I	Y	M	P	M	V	P	E	A	A	V	A	M	L	A	C	A	R	I	G
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		S	L	V	D	V	V	R	L	R	A	L	H	S	P	N	K	K	S	C	T	F	L	N	.	.	K	E	L	E	E	T	X	T	Y	E	Q	L	D	Q	H	A	K	A	I	A	A	T	L	Q	A	E	G	A	K	P	G	D	R	V	L	L	L	F	A	P	G	L	P	L	I	Q	A	F	L	G	C	L	Y	A	G
Template Known Secondary structure		S													T	T	S								.	.	T	T																								T	T			T	T									S	S													T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		A	V	H	S	V	I	F	G	G	F	S	P	.	.	.	E	A	V	A	G	R	I	I	D	S	N	S	R	L	V	I	T	S	D	E	G	V	R	A	G	R	S	I	P	L	K	K	N	V	D	D	A	L	K	N	P	N	V	T	S	V	E	H	V	V	V	L	K	R	T	G	G	K	I	D	W	Q	E	G	R
Query Conservation														.	.	.
Alig confidence														.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	I	A	V	P	I	Y	P	P	A	Q	E	K	L	L	D	K	A	Q	R	I	V	T	N	S	K	P	V	I	V	L	X	I	A	D	H	I	K	K	F	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	K	F	L	K	I	P
Template Known Secondary structure												S																	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																															130	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	W	W	H	D	L	V	E	Q	A	S	D	Q	H	Q	A	E	E	M	N	A	E	D	P	L	F	I	L	Y	T	S	G	S	T	G	K	P	K	G	V	L	H	T	T	G	G	Y	L	V	Y	A	A	L	T	F	K	Y	V	F	D	Y	H	P	G	D	I	Y	W	C	T	A	D	V	G	W	V	T	G	H
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		A	I	A	L	E	S	I	E	L	N	R	S	S	S	W	Q	P	T	S	I	K	S	N	D	I	A	F	L	Q	Y	T	S	G	S	T	X	H	P	K	G	V	X	V	S	H	H	N	L	L	D	N	L	N	K	.	I	F	T	S	F	H	X	N	D	E	T	I	I	F	S	W	L	P	P	H	H	D	X	G	L
Template Known Secondary structure					G	G	G			G	G	G	G	G	G								T	T	S								S	S		S	S	S																		.					T	T			T	T							S		T	T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		S	Y	L	L	Y	G	P	L	A	C	G	A	T	T	L	M	F	E	G	V	P	N	W	P	T	P	A	R	M	A	Q	V	V	D	K	H	Q	V	N	I	L	Y	T	A	P	T	A	I	R	A	L	M	A	E	G	.	D	K	A	I	E	G	T	D	R	S	S	L	R	I	L	G	S	V	G	E	P	I	N	P
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		I	G	C	I	L	T	P	I	Y	G	G	I	Q	A	I	X	X	S	P	F	S	F	L	Q	N	P	L	S	W	L	K	H	I	T	K	Y	K	A	T	I	S	G	S	P	N	F	A	Y	D	Y	C	V	K	R	I	R	E	E	K	K	E	G	L	D	L	S	S	W	V	T	A	F	N	G	A	E	P	V	R	E
Template Known Secondary structure			T	T	T							T															T											T		S						T												G	G	G	G	T	T				T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		393	.	.	.	.	.	.	400	.	.	.	.				.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.																								.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	W	E	W	Y	W	K	K	I	G	N	.	.	.	E	K	C	P	V	V	D	T	W	W	Q	T	E	T	G	G	F	M	I	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	G	A	T	E	L	K	A	G	S	A	T	R	P	F	F	G	V	Q	P
Query Conservation														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	X	E	H	F	Y	Q	A	F	K	E	F	G	F	R	K	E	A	F	Y	P	C	Y	G	L	A	E	A	T	L	L	V	T	G	G	T	P	G	S	S	Y	K	T	L	T	L	A	K	E	Q	F	Q	D	H	R	V	H	F	A	D	D	N	S	P	G	S	Y	K	L	V	S	S	G	N	P	I	Q	E	V
Template Known Secondary structure												G	G	G	T			G	G	G								G	G	G	S	S							T	T	S									S				S	S	S	B			B			T	T		T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		447	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.			.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure								.																																								.	.
Query SS confidence								.																																								.	.
Query Sequence		A	L	V	D	N	E	.	G	N	P	L	E	G	A	T	E	G	S	L	V	I	T	D	S	W	P	G	Q	A	R	T	L	F	G	D	H	E	R	F	E	Q	T	Y	F	S	T	.	.	F	K	N	M	Y	F	S	G	D	G	A	R	R	D	E	D	G	Y	Y	W	I	T	G	R	V	D	D	V	L	N	V	S
Query Conservation								.																																								.	.
Alig confidence								.																			.	.																				.	.
Template Conservation																											.	.
Template Sequence		K	I	I	D	P	D	T	L	I	P	C	D	F	D	Q	V	G	E	I	W	V	Q	S	N	S	.	.	V	A	K	G	Y	W	N	Q	P	E	E	T	R	H	A	F	A	G	K	I	K	D	D	A	I	Y	L	R	T	G	D	L	G	F	L	H	E	N	E	L	Y	V	T	G	R	I	K	D	L	I	I	I	Y
Template Known Secondary structure						T	T	T			B			T	T	B								S	T	T	.	.	S				B	T	T											B			T	T				B											T	T								S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.				.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																	.	.
Query SS confidence																				.	.	.																																	.	.
Query Sequence		G	H	R	L	G	T	A	E	I	E	S	A	L	V	A	H	P	K	.	.	.	I	A	E	A	A	V	V	G	I	P	H	N	I	K	G	Q	A	I	Y	A	Y	V	T	L	N	H	G	E	E	P	S	P	.	.	E	L	Y	A	E	V	R	N	W	V	R	K	E	I	G	P	L	A	T	P	D	V	L	H	W
Query Conservation																				.	.	.																																	.	.
Alig confidence																				.	.	.																																	.	.
Template Conservation
Template Sequence		G	K	N	H	Y	P	Q	D	I	E	F	S	L	X	H	S	P	L	H	H	V	L	G	K	C	A	A	F	V	I	Q	E	E	H	E	Y	K	L	T	V	X	C	E	V	K	N	R	F	X	D	D	V	A	Q	D	N	L	F	N	E	I	F	E	L	V	Y	E	N	H	Q	L	E	V	H	T	I	V	L	I	P
Template Known Secondary structure				T	T												S	G	G	G	G	G												T	T											S		T	T																						S
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	S	L	P	K	T	R	S	G	K	I	M	R	R	I	L	R	K	I	A	A	G	D	T	S	N	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	X	P	H	T	T	S	G	K	I	R	R	N	F	C	R	K	H	L	L	D	K	T	L	P	I	V
Template Known Secondary structure		T	T		S				S																T		S			S
Template Predicted Secondary structure
Template SS confidence
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.