Job Description P27550 Confidence 99.96% Date Thu Jan 5 11:44:02 GMT 2012 Rank 32 Aligned Residues 238 % Identity 13% Template c3hguB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:ehpf; PDBTitle: structure of phenazine antibiotic biosynthesis protein Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		M	N	A	E	D	P	L	F	I	L	Y	T	S	G	S	T	G	K	P	K	G	V	L	H	T	T	G	G	Y	L	V	Y	A	A	L	T	F	K	Y	V	F	.	.	D	Y	H	P	G	D	I	Y	W	C	T	A	D	V	G	W	V	T	G	H	S	Y	L	L	Y	G	P	L	A	C	G	A	T	T	L	M	F
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		V	P	Q	G	L	P	A	D	S	H	P	Q	V	Y	E	S	G	A	P	K	Y	V	V	A	Y	D	A	W	I	E	A	L	I	S	W	R	M	S	G	Y	Q	H	R	P	G	R	P	S	G	N	T	L	A	A	I	P	T	G	P	H	I	V	G	A	I	N	K	E	R	A	L	R	L	G	G	M	F	F	S	I
Template Known Secondary structure		S		T	T	S		T	T																													T	S	T	T	T	S	S	T	T										S			T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		331																			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	P	N	W	P	T	P	A	R	M	A	Q	V	V	D	K	H	Q	V	N	I	L	Y	T	A	P	T	A	I	R	A	L	M	A	E	G	D	K	A	I	E	G	T	D	R	S	S	L	R	I	L	G	S	V	G	E	P	I	N	P
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation																																																													.	.
Template Sequence		D	I	D	P	R	W	V	K	R	S	L	S	E	G	D	T	A	T	V	R	K	Y	T	H	H	L	V	D	Q	V	Q	N	T	L	M	N	Q	D	I	R	F	L	V	T	T	P	P	V	L	R	E	L	L	K	R	P	E	V	V	.	.	L	Q	M	K	Q	S	L	A	Q	I	T	L	G	G	T	E	L	N	L
Template Known Secondary structure														T	T																							S																T	T	S					.	.								S						S	S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450		.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		E	A	W	E	W	Y	W	K	K	I	G	N	E	K	C	P	V	V	D	T	W	W	Q	T	E	T	G	G	F	M	I	T	P	L	P	G	A	T	E	L	K	A	G	S	A	T	R	P	F	F	G	V	Q	P	A	L	V	D	.	N	E	G	N	P	L	E	G	A	T	E	G	S	L	V	I	T	D	S	W	P
Query Conservation																																																												.
Alig confidence												.																																.																.
Template Conservation												.																																.
Template Sequence		D	E	I	K	F	I	A	S	E	I	.	L	P	D	C	E	F	S	A	S	Y	G	S	T	S	A	L	G	V	S	R	S	L	L	I	T	S	E	S	Q	Q	V	.	I	Y	D	S	F	S	P	F	I	T	Y	D	V	V	D	S	I	T	A	Q	T	V	E	Y	G	E	R	G	N	V	I	V	T	H	L	S	P
Template Known Secondary structure											T	.		T	T										G	G	G	T										T	T			S		.						T	T	T								T	T	T			B			T	T												T
Template Predicted Secondary structure												.																																.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		472	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	Q	.	A	R	T	L	F	G	D	H	E	R	F	E	Q	T	Y	F	S	T	F	K	N
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		W	A	F	Y	P	R	V	A	E	R	D	T	A	I	R	L	P	G	V	S	G	F	A	G
Template Known Secondary structure		T																			S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions