Job Description P76335 Confidence 17.29% Date Thu Jan 5 12:21:55 GMT 2012 Rank 49 Aligned Residues 127 % Identity 11% Template d2gufa1 SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 1.95

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		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	E	A	W	T	V	G	A	K	Y	D	A	N	N	V	Y	L	A	A	M	Y	A	E	T	R	N	M	T	P	Y	G	G	G	E	F	D	N	G	E	S	R	S	A	I	A	N	K	T	Q	N	F	E	V	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	L	Q	S	K	G	K	D	L	G	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.																									.
Template Conservation																														.	.	.	.	.	.	.	.																									.
Template Sequence		R	I	K	G	V	E	A	T	A	N	F	D	T	G	P	L	T	H	T	V	S	Y	D	Y	V	D	A	R	.	.	.	.	.	.	.	.	N	A	I	T	D	T	P	L	L	R	R	A	K	Q	Q	V	K	Y	Q	L	D	W	Q	L	.	Y	D	F	D	W	G	I	T	Y	Q	Y	L	G	T	R	Y	D	K	D
Template Known Secondary structure															T	T														.	.	.	.	.	.	.	.		T	T	T			B		T	T			S												.	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																									.
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.									.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	H	D	G	N	G	D	P	R	Y	T	N	K	D	L	V	K	Y	V	D	I	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	N	D	D	D	F	Y	E	A	N	G	I	A	T	D	D	I	V	A	V	G	L	V	Y	Q	F
Query Conservation
Alig confidence							.	.	.																															.	.	.	.	.	.	.												.	.	.
Template Conservation							.	.	.																															.	.	.	.	.	.	.												.	.	.
Template Sequence		Y	S	S	Y	P	.	.	.	Y	Q	T	V	K	M	G	G	V	S	L	W	D	L	A	V	A	Y	P	V	T	S	H	L	T	V	R	G	K	I	.	.	.	.	.	.	.	A	N	L	F	D	K	D	Y	A	G	R	.	.	.	E	Y	T	L	S	G	S	Y	T	F
Template Known Secondary structure			S	S	S	S	.	.	.																				S	S	S	S								.	.	.	.	.	.	.		S	T	T								.	.	.
Template Predicted Secondary structure							.	.	.																															.	.	.	.	.	.	.												.	.	.
Template SS confidence
		531	.	.	.	.				.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.								.	.	.	.	570	.	.	.	.	.	.				.	.	.	580	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions