Job Description P76335 Confidence 98.60% Date Thu Jan 5 12:21:55 GMT 2012 Rank 12 Aligned Residues 190 % Identity 13% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		G	F	G	M	S	T	S	Y	D	F	D	F	G	L	S	L	G	A	A	Y	X	N	S	D	R	S	D	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	V	G	L	N	D	R	N	H	S	N	R	N	A	G	G	E	T	A	E	A	W	T	V	G	A	K	Y	D	A	N	N	.	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		G	W	N	A	G	I	L	Y	E	L	D	K	N	N	R	Y	A	L	T	Y	R	S	E	V	K	I	D	F	K	G	N	Y	S	S	D	L	N	R	A	F	N	N	Y	G	L	P	I	P	T	A	T	G	G	A	T	Q	S	G	Y	L	T	L	N	L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W
Template Known Secondary structure													T	T																							S		G	G	G	T	T	S			S	S					T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		Y	L	A	A	M	Y	A	E	T	R	.	.	.	.	N	M	T	P	Y	G	G	G	E	F	D	N	G	E	S	R	S	A	I	A	N	K	T	Q	N	F	E	V	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	L	Q	S	K	G	K	D	L	G	G	W	A	H	D	G	N	G	D	P	R	Y	T
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																																																			.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F	D	D	S	P	.	.	.	.	.	.	V	P	A	Q	N	R	S	I	S	I
Template Known Secondary structure												G	G	G									T	T	S																									S	S	S													S	.	.	.	.	.	.	S		T	T	T			S	S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		N	K	D	L	V	K	Y	V	D	I	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	.	.	.	N	L	L	D	N	D	D	D	F	Y	E	A	N	G	I	A	T	D	D	I	V	A	V	G	L	V	Y	Q	F
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S	V	D	V	G	V	S	Y	M	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	S	E	G	K	A	W	L	F	G	T	N	F	N	Y	A	F
Template Known Secondary structure																	S	S	S	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions