Job Description P76335 Confidence 97.93% Date Thu Jan 5 12:21:55 GMT 2012 Rank 22 Aligned Residues 117 % Identity 15% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		E	T	A	E	A	W	T	V	G	A	K	Y	D	A	.	N	N	V	Y	L	A	A	M	Y	A	E	T	R	N	M	T	P	Y	G	G	G	E	F	D	N	G	E	S	R	S	A	I	A	N	K	T	Q	N	F	E	V	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	L	Q	S	K	G	K	D	L
Query Conservation																.
Alig confidence																.																.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Sequence		E	N	K	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	.	.
Template Known Secondary structure																	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.																			S	S	S	S														.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.														.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	W	A	H	D	G	N	G	D	P	R	Y	T	N	K	D	L	V	K	Y	V	D	I	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	N	D	D	D	F	Y	E	A	N	G	I	A	T	D	D	I	V	A	V	G	L	V	Y	Q	F
Query Conservation
Alig confidence		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure		.	.						S	S	S																						T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions