Return to main results Retrieve Phyre Job Id

Job DescriptionP76335
Confidence92.37%DateThu Jan 5 12:21:55 GMT 2012
Rank38Aligned Residues232
% Identity14%Templatec3kvnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:esterase esta; PDBTitle: crystal structure of the full-length autotransporter esta from2 pseudomonas aeruginosa
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200........ .210.........220.........230
Predicted Secondary structure 































.....













Query SS confidence 




















































. . . . .





















Query Sequence  NNGFFGLVDGLNFALQYQGNNESGGPFGQEGSGSGDGRSLSKENGDGFGMSTS. . . . . YDFDFGLSLGAAYXNSDRSDRQ
Query Conservation                  
                                    .....
           
         
Alig confidence 




















































.....





















Template Conservation           
   
 
         
 
 
                      
 
                
        
Template Sequence  AASGDGNGYNLTLGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDDLK
Template Known Secondary structure  B


SSSTTTTTT
Template Predicted Secondary structure 


















Template SS confidence 















































































   366...370.........380.........390.........400.........410.........420.........430.........440.....
 
   231........240.........250.........260. .... ....270.........280.........290.........300.
Predicted Secondary structure 



















.....

....






















Query SS confidence 






























. . . . .



. . . .



































Query Sequence  VGVGLNDRNHSNRNAGGETAEAWTVGAKYDA. . . . . NNVY. . . . LAAMYAETRNMTPYGGGEFDNGESRSAIANKTQNFE
Query Conservation                           
  
  .....    ....    
                               
Alig confidence 






























.....



....



































Template Conservation 
                          

           
 
   
 
       
 
 
     
             
Template Sequence  RKFALGGGERSEKGDTNGHLWAFSARLGYDIAQQADSPWHLSPFVSADYARVEVDGYSEKGASATALDYDDQKRSSKRLG
Template Known Secondary structure  TT
S
S
TT
S


B
SS

TT


Template Predicted Secondary structure 



















Template SS confidence 















































































   446...450.........460.........470.........480.........490.........500.........510.........520.....
 
   302... ....310.........320.........330....... ..340.........350.........360.........370
Predicted Secondary structure  ..


















.........










Query SS confidence 



. .































. . . . . . . . .
































Query Sequence  VVAQ. . YQFDFGLRPSIAYLQSKGKDLGGWAHDGNGDP. . . . . . . . . RYTNKDLVKYVDIGATYYFNKNMSTYVDYKINL
Query Conservation    
 ..
           
                   .........             
  
 


 
 

 

    
Alig confidence 



..































.........
































Template Conservation   
                                                          
              
    
Template Sequence  AGLQGKYAFGSDTQLFAEYAHEREYEDDTQDLTMSLNSLPGNRFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRK
Template Known Secondary structure  SSSSS




TT




STT
Template Predicted Secondary structure 























Template SS confidence 















































































   526...530.........540.........550.........560.........570.........580.........590.........600.....
 
   371........380.........390.......
Predicted Secondary structure 

















Query SS confidence 


























Query Sequence  LDNDDDFYEANGIATDDIVAVGLVYQF
Query Conservation                       
 
  
Alig confidence 





..........










Template Conservation 
     ..........          
Template Sequence  GEDDTQ. . . . . . . . . . QSVSLALSLDF
Template Known Secondary structure  SS..........
Template Predicted Secondary structure 



..........
Template SS confidence 


























   606...610. ........620..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions