Return to main results Retrieve Phyre Job Id

Job DescriptionP76335
Confidence3.36%DateThu Jan 5 12:21:55 GMT 2012
Rank60Aligned Residues156
% Identity14%Templatec3fhhA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250.........260... ......270.........280.........290.........300
Predicted Secondary structure 






















.........






















Query SS confidence 

































. . . . . . . . .




































Query Sequence  QVGVGLNDRNHSNRNAGGETAEAWTVGAKYDANN. . . . . . . . . VYLAAMYAETRNMTPYGGGEFDNGESRSAIANKTQNF
Query Conservation                            
  
    .........      
                              
Alig confidence 

































.........




































Template Conservation              
  
        
 
                     
     
 
                       
Template Sequence  SIGRFYTNYWVPNPNLRPETNETQEYGFGLRFDDLMLSNDALEFKASYFDTKAKDYISTTVDFAAATTMSYNVPNAKIWG
Template Known Secondary structure 
SSSS




TT



S
TT


GGGT
Template Predicted Secondary structure 

































Template SS confidence 















































































   430.........440.........450.........460.........470.........480.........490.........500.........
 
   301........310.........320.........330.........340.........350........ .360.........370.........
Predicted Secondary structure 




























.









Query SS confidence 

























































.




















Query Sequence  EVVAQYQFDFGLRPSIAYLQSKGKDLGGWAHDGNGDPRYTNKDLVKYVDIGATYYFNK. NMSTYVDYKINLLDNDDDFYE
Query Conservation     
 
           
                                
  
 


. 
 

 

             
Alig confidence 



























........





















.











....




Template Conservation                              ........
  
   
         
                 ....     
Template Sequence  WDVMTKYTTDLFSLDVAYNRTRGKDTDT. . . . . . . . GEYISSINPDTVTSTLNIPIAHSGFSVGWVGTFAD. . . . RSTHI
Template Known Secondary structure 
SS
TTT........

B
SS

TTSS
....




Template Predicted Secondary structure 







........












....


Template SS confidence 















































































   510.........520.........530....... ..540.........550.........560.........570.. .....
 
   380.........390.......
Predicted Secondary structure 








Query SS confidence 

















Query Sequence  ANGIATDDIVAVGLVYQF
Query Conservation              
 
  
Alig confidence 

















Template Conservation        
   
    
  
Template Sequence  SSKQPGYGVNDFYVSYQG
Template Known Secondary structure 






Template Predicted Secondary structure 



Template SS confidence 

















   578.580.........590.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions