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Job DescriptionP76335
Confidence97.19%DateThu Jan 5 12:21:55 GMT 2012
Rank26Aligned Residues316
% Identity12%Templatec2y0lA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo
Resolution2.59 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.. .......70.........80.........90.........100.........110
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Query Sequence  LYGKVVGLHYFSDDSGSDGDMSYARIGFK. . . GETQIADQFTGYGQWEFNIGANGPESDKGNTATRLAFAGLGFGQNGTF
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Template Sequence  ASLETRNFYMNRDFRKREEWAQGFILNLQSGYTQGTVGFGLDAMGMLGVKLDS. . . . . . PDTYSKLGLTAKVKVSQS. EL
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   20.........30.........40.........50.........60.........70.. .......80.........90 ..
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  DYGRNYGVVYDVEAWTDMLPEFGGDTYAGADNFMNGRANGVATYRNNGFFGLVDGLNFALQYQGNNESGGPFGQEGSGSG
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Template Sequence  KVGTLIP. . . . . . . . . . . . . KLPSVQPNNGRIFPQIFEGALLTSKEIKDLGFTAGRLEKTK. . . . . . . . IDSEDLALNDK
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   117..120... ......130.........140.........150.........160.... .....170.....
 
   191........200.........210.........220..... ....230.........240.........250..
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Query Sequence  DGRSLSKENGDGFGMSTSYDFDFGLSLGAAYXNSD. . . . . . . . . . . . . . . . . . RSDRQVGVGLNDRNHSNRNAGGETAEA
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Template Sequence  NGRFAGVSADHFDLGGLDYKLTDQLTASYHYSNLQDVYRQHFVGLLHSWPIGPGELTSDLRFARSTDSGSAKAGGIDNKS
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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   253......260.........270........ .280.........290.........300......... 310.........320..
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Query Sequence  WTVGAKYDANNVYLAAMYAETRNMTP. . . . . . YGGGEFDNGESRSAIANKTQNFEVVAQYQFD. . . . FGLRPSIAYLQSK
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Template Sequence  LNGMFTYSLGNHAFGAAWQRMNGDDAFPYLEGSNPYLVNFVQVNDFAGPKERSWQLRYDYDFVGLGIPGLTFMTRYVKGD
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   260.........270.........280.........290.........300.........310.........320.........330.........
 
   323......330.........340.........350....... ..360.........370.........380.........390.......
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Query Sequence  GKDLGGWAHDGNGDPRYTNKDLVKYVDIGATYYFN. . . . KNMSTYVDYKINLLDNDDDFYEANGIATDDIVAVGLVYQF
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Template Sequence  NVEL. . . . . . . . . . . AGQGEGREWERNTELQYVFQSGALKNLGIRWRNATFRSNFTR. . . . . . . . . DIDENRLIVSYTL
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   340... ......350.........360.........370.........380..... ....390........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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