Job Description P76335 Confidence 96.62% Date Thu Jan 5 12:21:55 GMT 2012 Rank 29 Aligned Residues 145 % Identity 15% Template c2x4mD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	T	V	G	A	K	Y	D	A	N	N	V	Y	L	A	A	M	Y	A	E	T	R	N	M	T	P	Y	G	G	G	E	F	D	N	G	E	S	R	S	A	I	A	N	K	T	Q	N	F	E	V	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	L	Q	S	K	G	K	D	L	G	G	W	A	H
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		G	I	T	A	G	Y	Q	E	T	R	F	S	W	T	A	T	G	G	S	Y	S	Y	N	N	G	A	Y	T	G	N	F	P	K	G	V	R	V	I	G	Y	N	Q	R	F	S	M	P	Y	I	G	L	A	G	Q	Y	R	I	N	.	D	F	E	L	N	A	L	F	K	F	S	D	W	V	R	A	H	D	N	D	E
Template Known Secondary structure																		S						T	T	T	T							T	T																								T	.	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.																	.	.	390	.	.
Predicted Secondary structure																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	N	G	D	P	R	Y	T	N	K	D	L	V	.	.	.	K	Y	V	D	I	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	N	D	D	D	F	Y	E	A	N	G	I	A	T	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	V	G
Query Conservation																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Y	M	R	D	L	T	F	R	E	K	T	S	G	S	R	Y	Y	G	T	V	I	N	A	G	Y	Y	V	T	P	N	A	K	V	F	A	E	F	T	Y	S	K	Y	D	E	G	K	G	G	T	Q	T	I	D	K	N	S	G	D	S	V	S	I	G	G	D	A	A	G	I	S	N	K	N	Y	T	V	T	A	G
Template Known Secondary structure			G	G	G	T																									T	T																								T	T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		393	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	Y	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	Y	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions