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Job DescriptionP76335
Confidence95.35%DateThu Jan 5 12:21:55 GMT 2012
Rank35Aligned Residues231
% Identity12%Templatec2qomB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  GFFGLVDGLNFALQYQGNNESGGPFGQEGSGSGDGRSLSKENGDGFGMSTSYDFDFGLSLGAAYXNSDRSDRQVGVGLND
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Template Sequence  NYTHVQVGVDKKHELGLDLFTGFTVTHTDSSASADVFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFATR
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   10591060.........1070.........1080.........1090.........1100.........1110.........1120.........1130........
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  RNHSNRNAGGETAEAWTVGAKYDANNVYLAAMYAETRNMTPYGGGEFDNGESRSAIANKTQNFEVVAQYQFDFGLRPSIA
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Template Sequence  DYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKSFSGKWKVTAR
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B



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   1143......1150.........1160.........1170.........1180.........1190.........1200.........1210.........1220..
 
   318.320.........330...... ...340.........350.........360.........370.........380.........390..
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Query Sequence  YLQSKGKDLGGWAHDGNGD. . . . . PRYTNKDLVKYVDIGATYYFNKNMSTYVDYKINLLDNDDDFYEANGIATDDIVAVG
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Template Sequence  AGLGYQFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYN. . . . . . . . . VDNAVNAN
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TTB


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   1225....1230.........1240.........1250.........1260.........1270.........1280....... ..1290.....
 
   393....
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Query Sequence  LVYQF
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Template Sequence  FRYSF
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   1296...1300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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