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Job DescriptionP76335
Confidence5.08%DateThu Jan 5 12:21:55 GMT 2012
Rank56Aligned Residues236
% Identity13%Templatec1xkhC_
PDB info PDB header:membrane proteinChain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  GLVDGLNFALQYQGNNESGGPFGQEGSGSGDGRSLSKENGDGFGMSTSYDFDFGLSLGAAYXNSDRSDRQVGVGLNDRNH
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Template Sequence  GTSASFSHWEGKSYWNLRNYDNTTDDFINWDGDIGKPDWGTPSQYIDDKTRQLGSYXTARFNVTDDLNLFLGGRVVDYRV
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   477..480.........490.........500.........510.........520.........530.........540.........550......
 
   241........250.........260.........270.........280.........290.........300........ .310.........
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Query Sequence  SNRNAGGETAEAWTVGAKYDANNVYLAAMYAETRNMTPYGGGEFDNGESRSAIANKTQNFEVVAQYQF. DFGLRPSIAYL
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Template Sequence  TGLNPTIRESGRFIPYVGAVYDLNDTYSVYASYTDIFXPQDSWYRDSSNKLLEPDEGQNYEIGIKGEYLDGRLNTSLAYF
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   557..560.........570.........580.........590.........600.........610.........620.........630......
 
   320.........330.........340. ........350.........360.........370.........380.........390.
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Query Sequence  QSKGKDLGGWAHDGNGDPRYTN. . . . . . . . KDLVKYVDIGATYYFNKNMSTYVDYKINLLDNDDDFYEANGIATDDIVAV
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Template Sequence  EIHEENRAEEDALYNSKPTNPAITYAYKGIKAKTKGYEAEISGELAPGWQVQAGYTHKIIRDDSGKKVSTWEPQ. DQLSL
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   637..640.........650.........660.........670.........680.........690.........700.........710 .....
 
   392.....
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Query Sequence  GLVYQF
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Template Sequence  YTSYKF
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   716...720.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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