 |
Job Description | P33358 | Confidence | 96.22% | Date | Thu Jan 5 11:51:59 GMT 2012 |
Rank | 25 | Aligned Residues | 85 |
% Identity | 13% | Template | d1xrsb1 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.80 |
|
 |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
. | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
R | K | K | Q | G | K | D | A | L | V | V | G | W | N | I | Q | D | T | T | R | L | . |
. |
W | L | E | G | W | I | A | S | Q | Q | G | W | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | D | V | L | A | H | S | L | N | Q | L | R | P | . |
. |
. |
. |
E | L | F | E | G | R | T | L | L | V | W | C | G | E | N | R | T | . |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
| . | . |   |
|   |
|
|   |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |   |
|   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
| . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|   |   |   |
Template Sequence |   |
E | N | I | G | R | K | I | V | V | V | G | A | S | T | G | T | D | A | H | T | V | G | I | D | A | I | M | N | M | K | G | Y | A | G | H | Y | G | L | E | R | Y | E | M | I | D | A | Y | N | L | G | S | Q | V | A | N | E | D | F | I | K | K | A | V | E | L | E | A | D | V | L | L | V | S | Q | T | V | T | Q | K | N |
Template Known Secondary structure |   |
 |  | T |
| S |
|  |  |  |  |  |  |  | B | T | T |
|
|
|
|  |  |  |  |  |  |  | S | T | T |
| B | T | T | B |
|
| G | G | G |
| T | T |  |  |  |  |  |
|
| S | S | B |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
|
| T | T | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |
  |   |
|
|
|
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
. | . | . | 240 | . | . |
Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
S | A | Q | Q | Q | Q | L | T | S | W | Q | E | Q | G | H | . |
. |
. |
D | I | F | P | L | G |
Query Conservation |   |
. | . | . |   |
|
|
|   |   |
|   |
|   |   |   |   |
|   | . | . | . |   |   |   |   |   |
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |
|
|
|
|
Template Sequence |   |
V | H | I | Q | N | M | T | H | L | I | E | L | L | E | A | E | G | L | R | D | R | F | V | L | L | C | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|