Job Description P33358 Confidence 93.05% Date Thu Jan 5 11:51:59 GMT 2012 Rank 32 Aligned Residues 89 % Identity 11% Template c3op9A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:pli0006 protein; PDBTitle: crystal structure of transcriptional regulator from listeria innocua Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	I	G	E	V	A	L	L	C	D	I	N	P	V	T	L	R	A	W	Q	R	R	Y	G	L	L	K	P	Q	R	T	D	G	G	H	R	L	F	N	D	A	D	I	D	R	I	R	E	I	K	R	W	I	D	N	G	V	Q	V	S	K	V	K	M	L	L	S	N	E	N	V	D	V	Q	N	G	W	R	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.							.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.							.	.	.
Template Sequence		L	K	N	H	Q	I	A	E	L	L	N	V	Q	T	R	T	V	A	Y	Y	X	S	.	.	.	.	.	.	.	.	.	.	.	.	G	E	T	K	P	D	I	E	K	L	I	R	L	A	T	Y	F	.	.	.	.	.	H	L	S	I	D	E	.	.	.	L	V	G	Y	V	Q	E	V	W	N	D	L	S	L	K
Template Known Secondary structure												T	S											.	.	.	.	.	.	.	.	.	.	.	.	T	S	S															.	.	.	.	.	T						.	.	.			T							S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.							.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	E	T	L	L	T	Y	L	Q	S	G	N	L	H	S	L	R	T	W	I	K	E	R	G	Q	D	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	L	L	S	L	N	L	R	S	E	E	E	I	A	K	I	K	I	L	V	D	T	V	E	T	L	Y	P
Template Known Secondary structure							G	G	G	S																			S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions