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Job DescriptionP33358
Confidence90.62%DateThu Jan 5 11:51:59 GMT 2012
Rank35Aligned Residues66
% Identity12%Templatec3fymA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus
Resolution1.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50........ .60.........70.........80.
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Query Sequence  YTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWID. NGVQVSKVKMLLSNENVDVQNGW
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Template Sequence  MTLTELEQRTGIKREMLVHIE. . . . . . . . . . . . NNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEW
Template Known Secondary structure 




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GGGSSSGGGTT

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   1017..1020.........1030....... ..1040.........1050.........1060.........1070.........1080...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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