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| Job Description | P33358 | | Confidence | 29.93% | Date | Thu Jan 5 11:51:59 GMT 2012 |
| Rank | 458 | Aligned Residues | 64 |
| % Identity | 14% | Template | c2pjpA_ |
| PDB info |
PDB header:translation/rna | Chain: A: PDB Molecule:selenocysteine-specific elongation factor; |
PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna
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| Resolution | 2.30 Å |
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4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
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20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
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| Query Sequence | |
Y | T | I | G | E | V | A | L | L | C | D | I | N | P | V | T | . |
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L | R | A | W | Q | R | R | Y | G | L | L | K | P | Q | R | T | D | G | G | H | R | L | F | N | D | A | D | I | D | R | I | R | E | I | K | R | W | I | . |
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D | N | G | V | Q | V | S | K | V | K | M | L | L | S |
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| Template Conservation | |
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| Template Sequence | |
W | W | V | R | D | L | A | K | E | T | G | T | D | E | Q | A | M | R | L | T | L | R | Q | A | A | Q | Q | G | I | I | T | A | I | V | K | D | . |
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R | Y | Y | R | N | D | R | I | V | E | F | A | N | M | I | R | D | L | D | Q | E | C | G | S | T | C | A | A | D | F | R | D | R | L | G |
| Template Known Secondary structure | |
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| Template Predicted Secondary structure | |
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507 | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | |
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. | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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