Return to main results Retrieve Phyre Job Id

Job DescriptionP33358
Confidence92.45%DateThu Jan 5 11:51:59 GMT 2012
Rank33Aligned Residues73
% Identity15%Templatec2kfsA_
PDB info PDB header:dna-binding proteinChain: A: PDB Molecule:conserved hypothetical regulatory protein; PDBTitle: nmr structure of rv2175c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40......... 50..... ....60.........70...
Predicted Secondary structure 




















........






Query SS confidence 















































. . . . . . .





.

















Query Sequence  ALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDR. . . . . . . IREIKR. WIDNGVQVSKVKMLLSNE
Query Conservation    
 
 


   

   


 

    
  
 
   
 
 
    
  .......
  
  .    
  
  
  

   
Alig confidence 
































..












.......





.

















Template Conservation    

  


 




   
        



  ..

   


 

   
     
 


 

 
 
    
   

 

Template Sequence  PTYDLPRVAELLGVPVSKVAQQLREGHLVAVRR. . AGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTP
Template Known Secondary structure 
T

TTS


..TTGGGB
TTS
B
TTTT

TS
Template Predicted Secondary structure 









..
















Template SS confidence 















































































   28.30.........40.........50.........60 .........70.........80.........90.........100.....
 
   74..
Predicted Secondary structure 


Query SS confidence 


Query Sequence  NVD
Query Conservation     
Alig confidence 


Template Conservation 
  
Template Sequence  DPS
Template Known Secondary structure 
Template Predicted Secondary structure 


Template SS confidence 


   106..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions