Return to main results Retrieve Phyre Job Id

Job DescriptionP33358
Confidence99.05%DateThu Jan 5 11:51:59 GMT 2012
Rank16Aligned Residues155
% Identity10%Templatec1k98A_
PDB info PDB header:transferaseChain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment
Resolution3.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100.........110. ........120.........130...... ...140.........150......
Predicted Secondary structure 


.
......
Query SS confidence 



























.
























. .



















. . . .
Query Sequence  QQETLLTYLQSGNLHSLRTWIKERGQDY. PAQTLTTHLFIPLRRRLQCQQPTLQ. . ALLAILDGVLINYIAICLAS. . . .
Query Conservation      
  

   
   
   
       .        

 


  

       ..   
   
 
       
  ....
Alig confidence 



























.
























..



















....
Template Conservation    


  


 
        
  

  
  
  

   
  

  

 

  
   




 

  

 

  
 
 
  
Template Sequence  VNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEA
Template Known Secondary structure  T

SSTSSSTTTTSS
TTSS
Template Predicted Secondary structure 












Template SS confidence 















































































   659660.........670.........680.........690.........700.........710.........720.........730........
 
   157..160.........170......... 180.........190.........200.... .....210.........220. .......
Predicted Secondary structure  .















..









....








.
Query SS confidence  .






















. .
























. . . .
















.






Query Sequence  . ARKKQGKDALVVGWNIQDTTRLW. . LEGWIASQQGWRIDVLAHSLNQLRP. . . . ELFEGRTLLVWCGENRT. SAQQQQL
Query Conservation  .         

          
 ..
 

 
   
  
  

   
   
....         
      
. 


  
Alig confidence  .






















..
























....
















.






Template Conservation          
 





 










   
   

 




 


 
 




    










 
   
   
Template Sequence  SKEQGKTNGKMVIATVKGDVGDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVA
Template Known Secondary structure  SSS



S

SS



TTT
S

TT
S
S
Template Predicted Secondary structure 




























Template SS confidence 















































































   739740.........750.........760.........770.........780.........790.........800.........810........
 
   229230........
Predicted Secondary structure 




Query SS confidence 









Query Sequence  TSWQEQGHDI
Query Conservation   
    
   
Alig confidence 









Template Conservation    
   
   
Template Sequence  KEMERQGFTI
Template Known Secondary structure  TT

S
Template Predicted Secondary structure 




Template SS confidence 









   819820........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions