Job Description P37681 Confidence 16.61% Date Thu Jan 5 11:56:55 GMT 2012 Rank 43 Aligned Residues 212 % Identity 12% Template d2vdfa1 SCOP info Transmembrane beta-barrels OMPT-like Outer membrane adhesin/invasin OpcA Resolution 1.95

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		A	S	E	L	S	I	G	A	G	A	A	Y	N	E	S	P	Y	R	G	Y	N	E	N	T	K	A	I	P	L	I	S	Y	E	G	D	T	F	Y	V	R	Q	T	T	L	G	F	I	L	.	S	Q	S	E	K	N	E	L	S	L	T	A	S	W	M	P	L	E	F	D	P	T	D	N	D	D	Y	A	M	Q	Q
Query Conservation																																																		.
Alig confidence																																								.	.									.
Template Conservation																																								.	.
Template Sequence		A	N	E	F	T	V	H	T	D	L	S	S	I	S	S	T	R	A	F	L	K	E	K	H	K	A	A	K	H	I	G	V	R	A	D	I	P	F	.	.	D	A	N	Q	G	I	R	L	E	A	G	F	G	R	S	K	K	N	I	I	N	L	E	T	D	E	N	K	L	G	K	T	K	N	V	K	L	P	T	G
Template Known Secondary structure																			T	T																			S	.	.	S	S	S																										T	S	S									S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																		.	.																			.
Query SS confidence																		.	.	.	.	.	.	.																		.	.																			.
Query Sequence		L	D	K	R	D	S	T	A	M	A	G	V	A	W	Y	H	.	.	.	.	.	.	.	H	E	R	W	G	T	V	K	A	S	A	A	A	D	V	L	D	.	.	N	S	N	G	W	V	G	E	L	S	V	F	H	K	M	Q	I	G	.	R	L	S	L	T	P	A	L	G	V	L	Y	Y	D	E	N	F	S	D
Query Conservation																		.	.	.	.	.	.	.																		.	.																			.
Alig confidence																		.	.	.	.	.	.	.																		.	.																			.																		.	.
Template Conservation																																																																																.	.
Template Sequence		V	P	E	N	R	I	D	L	Y	T	G	Y	T	Y	T	Q	T	L	S	D	S	L	N	F	R	V	G	A	G	L	G	F	E	S	S	K	D	S	I	L	H	S	S	R	Q	S	W	L	A	K	V	H	A	D	L	L	S	Q	L	G	N	G	W	Y	I	N	P	W	S	E	V	K	F	D	L	N	S	R	.	.
Template Known Secondary structure																					T	T																																								T	T																	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		Y	Y	Y	G	I	S	E	S	E	S	R	R	S	G	L	A	S	Y	S	A	Q	D	A	W	V	P	Y	V	S	L	T	A	K	Y	P	I	G	E	H	V	V	L	M	A	S	A	G	Y	S	E	L	P	.	.	E	E	I	T	D	S	P	M	I	D	R	N	E	S	F	T	F	V	T	G	V	S	W	R	F
Query Conservation																																																						.	.
Alig confidence								.	.	.	.	.	.	.	.	.						.																																.	.
Template Conservation								.	.	.	.	.	.	.	.	.						.
Template Sequence		Y	K	L	N	T	D	.	.	.	.	.	.	.	.	.	I	N	Q	K	T	.	N	G	W	G	F	G	L	G	A	N	I	G	K	K	L	G	A	S	I	E	A	G	P	F	Y	K	Q	R	T	Y	K	E	S	G	E	F	S	V	S	L	T	I	P	K	T	S	I	R	E	Y	G	L	R	V	G	I	K	F
Template Known Secondary structure								.	.	.	.	.	.	.	.	.						.																																				B				B
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.						.
Template SS confidence
		169	170	.	.	.	.										.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions