Job Description P37681 Confidence 96.10% Date Thu Jan 5 11:56:55 GMT 2012 Rank 14 Aligned Residues 188 % Identity 17% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.								.	.
Query SS confidence																																																																							.	.								.	.
Query Sequence		E	S	P	Y	R	G	Y	N	E	N	T	K	A	I	P	L	I	S	Y	E	G	D	T	F	Y	V	R	Q	T	T	L	G	F	I	L	S	Q	S	E	K	N	E	L	S	L	T	A	S	W	M	P	L	E	F	D	P	T	D	N	D	D	Y	A	M	Q	Q	L	D	K	.	.	R	D	S	T	A	M	A	.	.
Query Conservation																																																																							.	.								.	.
Alig confidence																						.	.																																																.	.								.	.
Template Conservation																						.	.
Template Sequence		D	S	S	N	P	G	T	W	T	D	E	A	R	H	P	D	T	Q	L	N	.	.	Y	A	N	E	F	D	L	N	I	K	G	W	L	L	N	E	P	N	Y	R	L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N
Template Known Secondary structure			T	T	S	T	T	S		S												.	.																	S	S																									B			T	T		S	S		B			B			T
Template Predicted Secondary structure																						.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	V	A	W	Y	H	H	E	R	W	G	T	V	K	A	S	A	A	A	D	V	L	D	N	S	N	G	W	V	G	E	L	S	V	F	H	K	M	Q	I	G	R	L	S	L	T	P	A	L	G	V	L	Y	Y	D	E	N	F	S	D	Y	Y	Y	G	I	S	E	S	E	S	R	R	S	G	L	A	S
Query Conservation		.	.	.
Alig confidence		.	.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	E	D	F	E	L	G	G	T	F	K	Y	S	G	W	V	E	S	S	D	N	D	E	H	Y	D	P	K	G	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		S																						T	T																								S	S	S																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.																.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	A	Q	D	A	W	V	P	Y	V	S	L	T	A	K	Y	P	I	G	E	H	V	V	L	M	A	S	A	G	Y	S	E	L	P	E	E	I	T	D	S	P	M	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	E	S	F	T	F	V	T	G	V	S	W	R	F
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T	S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A	G	I	E	N	Y	N	F	I	T	T	A	G	L	K	Y	T	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.											T	T																								T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions