Job Description P37681 Confidence 98.16% Date Thu Jan 5 11:56:55 GMT 2012 Rank 7 Aligned Residues 116 % Identity 17% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																		.										.	.																									.
Query SS confidence																		.										.	.																									.
Query Sequence		K	R	D	S	T	A	M	A	G	V	A	W	Y	H	H	E	.	R	W	G	T	V	K	A	S	A	.	.	A	A	D	V	L	D	N	S	N	G	W	V	G	E	L	S	V	F	H	K	M	Q	I	G	.	R	L	S	L	T	P	A	L	G	V	L	Y	Y	D	E	N	F	S	D	Y	Y	Y	G	I	S	E	S
Query Conservation																		.										.	.																									.
Alig confidence																		.										.	.																									.																				.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Q	H	E	N	K	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	Y	S	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T	T																																S	S	S	S																			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	R	R	S	G	L	A	S	Y	S	A	Q	D	A	W	V	P	Y	V	S	L	T	A	K	Y	P	I	G	E	H	V	V	L	M	A	S	A	G	Y	S	E	L	P	E	E	I	T	D	S	P	M	I	D	R	N	E	S	F	T	F	V	T	G	V	S	W	R	F
Query Conservation
Alig confidence		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure		.	.	.	.	.	S	S	S																						T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																	.	.	.	.	150	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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